Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.35□□□□□ -1.55
SNRPA1P09661 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.35□□□□□ -1.55
SNRPA1P09661 AC006362.1-201ENST00000567392 174 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AC006270.3-201ENST00000605967 1036 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AC008443.7-201ENST00000622195 246 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.35□□□□□ -1.55
SNRPA1P09661 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
SNRPA1P09661 OR5BE1P-202ENST00000641168 1176 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.35□□□□□ -1.55
SNRPA1P09661 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SNRPA1P09661 MAPK10-320ENST00000641462 6696 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SNRPA1P09661 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.35□□□□□ -1.55
SNRPA1P09661 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 AC116667.1-201ENST00000604855 2072 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 AC093311.1-201ENST00000506586 2021 ntBASIC5.35□□□□□ -1.55
SNRPA1P09661 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNRPA1P09661 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SNRPA1P09661 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 AL356473.1-201ENST00000406203 1408 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SNRPA1P09661 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SNRPA1P09661 HMGB1P5-201ENST00000255320 642 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 Y_RNA.553-201ENST00000384670 102 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.34□□□□□ -1.55
SNRPA1P09661 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC004022.2-201ENST00000413824 193 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AL009174.1-201ENST00000426577 416 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 COX6CP18-201ENST00000448769 222 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AC104306.1-201ENST00000449702 371 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 RPL7P1-201ENST00000468161 747 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 RPL7P9-201ENST00000468715 747 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AL024509.2-201ENST00000493462 493 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 RNU6-678P-201ENST00000516832 109 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.34□□□□□ -1.55
SNRPA1P09661 AC078795.2-201ENST00000602835 1252 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AL592221.1-201ENST00000605266 382 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AC099842.1-201ENST00000619919 596 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 AC008785.1-201ENST00000624475 456 ntBASIC5.34□□□□□ -1.55
SNRPA1P09661 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNRPA1P09661 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SNRPA1P09661 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SNRPA1P09661 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNRPA1P09661 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 AC093536.2-201ENST00000565257 1406 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SNRPA1P09661 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 MTND5P29-201ENST00000458676 1807 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SNRPA1P09661 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SNRPA1P09661 RNU6-253P-201ENST00000384730 105 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 RN7SKP202-201ENST00000410439 330 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AF274854.1-201ENST00000413236 615 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 AL049610.1-201ENST00000423374 372 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AL590103.1-201ENST00000434488 307 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AC006011.1-201ENST00000442758 349 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 MTCO1P19-201ENST00000443487 500 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 BX248409.1-201ENST00000455497 255 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 RPL5P24-201ENST00000463742 885 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 MTND1P16-201ENST00000465177 898 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNRPA1P09661 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 SLC25A15P5-201ENST00000508033 253 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 snoU109.6-201ENST00000516831 118 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 PHBP17-201ENST00000528576 541 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.33□□□□□ -1.56
SNRPA1P09661 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SNRPA1P09661 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.33□□□□□ -1.56
SNRPA1P09661 AC008759.1-201ENST00000589783 983 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 U73023.1-201ENST00000603134 700 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AL021997.1-201ENST00000605757 193 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AC005332.10-201ENST00000612725 619 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AC022106.2-201ENST00000620114 757 ntBASIC5.33□□□□□ -1.56
SNRPA1P09661 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms