Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC008264.2-201ENST00000610193 3731 ntBASIC3.7□□□□□ -1.82
TPM1P09493 RNU6-335P-201ENST00000364563 113 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.7□□□□□ -1.82
TPM1P09493 CRYBB2P1-203ENST00000415709 538 ntBASIC3.7□□□□□ -1.82
TPM1P09493 SDCBPP3-201ENST00000419629 891 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AC023128.2-201ENST00000420880 1223 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AC012065.2-201ENST00000421295 375 ntBASIC3.7□□□□□ -1.82
TPM1P09493 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM1P09493 Z77249.1-201ENST00000444622 1175 ntBASIC3.7□□□□□ -1.82
TPM1P09493 HMGB1P48-201ENST00000446155 598 ntBASIC3.7□□□□□ -1.82
TPM1P09493 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM1P09493 Z99127.3-201ENST00000448158 395 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 RPL7P5-201ENST00000471472 736 ntBASIC3.7□□□□□ -1.82
TPM1P09493 NDUFA5P9-201ENST00000472609 340 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AC104689.1-201ENST00000473356 768 ntBASIC3.7□□□□□ -1.82
TPM1P09493 HMGB1P38-201ENST00000490557 577 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AC093278.1-201ENST00000494700 600 ntBASIC3.7□□□□□ -1.82
TPM1P09493 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 AC112198.1-201ENST00000505369 1220 ntBASIC3.7□□□□□ -1.82
TPM1P09493 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 MTCO3P42-201ENST00000509488 518 ntBASIC3.7□□□□□ -1.82
TPM1P09493 HPRT1P1-201ENST00000509498 657 ntBASIC3.7□□□□□ -1.82
TPM1P09493 MTCO3P39-201ENST00000514812 518 ntBASIC3.7□□□□□ -1.82
TPM1P09493 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.7□□□□□ -1.82
TPM1P09493 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.7□□□□□ -1.82
TPM1P09493 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 AC015917.1-201ENST00000579654 510 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM1P09493 AC006023.2-201ENST00000609916 167 ntBASIC3.7□□□□□ -1.82
TPM1P09493 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 ZYXP1-201ENST00000617638 118 ntBASIC3.7□□□□□ -1.82
TPM1P09493 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM1P09493 AC119674.1-207ENST00000641355 633 ntBASIC3.7□□□□□ -1.82
TPM1P09493 MTND4P34-201ENST00000572715 1371 ntBASIC3.7□□□□□ -1.82
TPM1P09493 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TPM1P09493 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TPM1P09493 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM1P09493 AC010733.2-201ENST00000589496 5702 ntBASIC3.69□□□□□ -1.82
TPM1P09493 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM1P09493 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM1P09493 RPL32P3-201ENST00000359025 275 ntBASIC3.69□□□□□ -1.82
TPM1P09493 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
TPM1P09493 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
TPM1P09493 RNA5SP44-201ENST00000410446 133 ntBASIC3.69□□□□□ -1.82
TPM1P09493 TCEA1P4-201ENST00000415066 844 ntBASIC3.69□□□□□ -1.82
TPM1P09493 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.69□□□□□ -1.82
TPM1P09493 RPL7P2-201ENST00000427639 268 ntBASIC3.69□□□□□ -1.82
TPM1P09493 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
TPM1P09493 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TPM1P09493 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.69□□□□□ -1.82
TPM1P09493 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.69□□□□□ -1.82
TPM1P09493 AC108860.1-201ENST00000484521 383 ntBASIC3.69□□□□□ -1.82
TPM1P09493 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM1P09493 AC025459.1-201ENST00000504072 156 ntBASIC3.69□□□□□ -1.82
TPM1P09493 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.69□□□□□ -1.82
TPM1P09493 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.69□□□□□ -1.82
TPM1P09493 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM1P09493 RNA5SP385-201ENST00000515947 110 ntBASIC3.69□□□□□ -1.82
TPM1P09493 RNA5SP217-201ENST00000515959 91 ntBASIC3.69□□□□□ -1.82
TPM1P09493 SNORA70.18-201ENST00000516696 98 ntBASIC3.69□□□□□ -1.82
TPM1P09493 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TPM1P09493 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TPM1P09493 OR8R1P-201ENST00000543943 764 ntBASIC3.69□□□□□ -1.82
TPM1P09493 AC090751.1-201ENST00000566966 267 ntBASIC3.69□□□□□ -1.82
TPM1P09493 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM1P09493 MIR4506-201ENST00000584693 77 ntBASIC3.69□□□□□ -1.82
TPM1P09493 SNORD39.4-201ENST00000620099 78 ntBASIC3.69□□□□□ -1.82
TPM1P09493 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
TPM1P09493 SNORA51.4-201ENST00000364993 124 ntBASIC3.68□□□□□ -1.82
TPM1P09493 RNU6-98P-201ENST00000384173 107 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AC007066.1-201ENST00000392902 381 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AL138880.1-201ENST00000405824 642 ntBASIC3.68□□□□□ -1.82
TPM1P09493 RNU4-74P-201ENST00000411280 161 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TPM1P09493 DBIP2-201ENST00000419076 262 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM1P09493 AC244505.4-201ENST00000434905 287 ntBASIC3.68□□□□□ -1.82
TPM1P09493 CST9LP2-201ENST00000437612 320 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.68□□□□□ -1.82
TPM1P09493 SSXP5-201ENST00000443473 287 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AP002345.1-201ENST00000456493 928 ntBASIC3.68□□□□□ -1.82
TPM1P09493 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.68□□□□□ -1.82
TPM1P09493 RN7SKP116-201ENST00000516902 319 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM1P09493 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.68□□□□□ -1.82
TPM1P09493 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM1P09493 OR4R3P-201ENST00000525084 838 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.68□□□□□ -1.82
TPM1P09493 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.68□□□□□ -1.82
TPM1P09493 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM1P09493 HSPE1P5-201ENST00000561489 272 ntBASIC3.68□□□□□ -1.82
TPM1P09493 MIMT1-201ENST00000597105 1050 ntBASIC3.68□□□□□ -1.82
TPM1P09493 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM1P09493 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TPM1P09493 XPOTP1-201ENST00000443317 2398 ntBASIC3.68□□□□□ -1.82
TPM1P09493 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TPM1P09493 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms