Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 RN7SL75P-201ENST00000461926 281 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 RN7SL504P-201ENST00000494496 287 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 HMGB1P23-201ENST00000518743 568 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC037471.2-201ENST00000564941 598 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC053481.3-201ENST00000577881 843 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC069200.1-201ENST00000609511 323 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC104820.1-201ENST00000624183 307 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTDNEP1O95476 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.6□□□□□ -1.83
CTDNEP1O95476 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
CTDNEP1O95476 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTDNEP1O95476 OR1S2-201ENST00000302592 978 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 RNU6-819P-201ENST00000364116 107 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 RPL31P52-201ENST00000407532 367 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 RPL7P8-201ENST00000411964 730 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC007899.1-201ENST00000412776 775 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AL158156.1-201ENST00000422509 473 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AL356806.1-201ENST00000422524 916 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 USP9YP7-201ENST00000436723 430 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AL606490.8-201ENST00000441624 319 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC016696.1-201ENST00000446949 318 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC239367.2-201ENST00000447309 705 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 USP9YP32-201ENST00000452432 430 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 MTND2P3-201ENST00000452458 470 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 PRDX3P4-201ENST00000470828 747 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 KCTD9P5-201ENST00000504141 1170 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 OR4C2P-201ENST00000530855 1064 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AL109741.3-201ENST00000561748 592 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC100814.1-201ENST00000606963 623 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AL118556.2-201ENST00000614375 824 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC123768.4-201ENST00000616244 701 ntBASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.59□□□□□ -1.83
CTDNEP1O95476 AC087565.3-202ENST00000642085 1603 ntBASIC3.59□□□□□ -1.84
CTDNEP1O95476 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 RNU4-47P-201ENST00000410876 114 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AC009965.2-201ENST00000425328 970 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 NPM1P24-201ENST00000428039 894 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL358232.1-201ENST00000448030 501 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 RPL7L1P8-201ENST00000469911 741 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AC074250.1-201ENST00000511117 192 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 USP9YP5-201ENST00000511770 630 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 SEC11B-201ENST00000518383 499 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AC026616.1-201ENST00000523157 525 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL161713.1-201ENST00000555538 145 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 RN7SL339P-201ENST00000580597 296 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 YPEL5P2-201ENST00000605553 359 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 AC007318.2-201ENST00000620999 243 ntBASIC3.58□□□□□ -1.84
CTDNEP1O95476 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTDNEP1O95476 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTDNEP1O95476 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTDNEP1O95476 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTDNEP1O95476 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.58□□□□□ -1.84
CTDNEP1O95476 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms