Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-263P-201ENST00000363811 107 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 RNU6-629P-201ENST00000384061 103 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 SNORA51.12-201ENST00000384448 134 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AL031121.1-201ENST00000406553 254 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 Z99755.1-201ENST00000414048 380 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 EI24P1-201ENST00000416584 867 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 MTCYBP24-201ENST00000420387 1106 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 AL590103.1-201ENST00000434488 307 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.94□□□□□ -1.94
UPK1BO75841 HMGB3P6-201ENST00000444896 598 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC087879.1-201ENST00000474343 374 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC007688.1-201ENST00000475592 759 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 RN7SL177P-201ENST00000476596 299 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1BO75841 AC025181.1-201ENST00000477507 416 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC110792.1-201ENST00000491826 472 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC005726.1-201ENST00000494679 427 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1BO75841 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.94□□□□□ -1.94
UPK1BO75841 SYF2P1-201ENST00000550658 413 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC2.94□□□□□ -1.94
UPK1BO75841 ZNF192P1-203ENST00000565888 810 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 MIR4270-201ENST00000581799 70 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC017100.2-201ENST00000584628 355 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.94□□□□□ -1.94
UPK1BO75841 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC007566.2-201ENST00000603642 413 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC112230.1-201ENST00000604342 547 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 HSPE1P14-201ENST00000605812 302 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AL391497.1-201ENST00000608671 547 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AL591516.1-201ENST00000611326 274 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 U73479.1-201ENST00000618062 168 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AL163051.2-201ENST00000618976 735 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 AC068870.2-201ENST00000620635 389 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.94□□□□□ -1.94
UPK1BO75841 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1BO75841 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1BO75841 AC011978.2-201ENST00000569835 2054 ntBASIC2.94□□□□□ -1.94
UPK1BO75841 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1BO75841 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UPK1BO75841 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
UPK1BO75841 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.94□□□□□ -1.94
UPK1BO75841 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1BO75841 AL122126.1-201ENST00000546905 1318 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AL355578.1-201ENST00000607405 1328 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AC139713.2-214ENST00000642059 1811 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.93□□□□□ -1.94
UPK1BO75841 AC046144.1-201ENST00000478559 1853 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AL132640.2-201ENST00000559968 1698 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
UPK1BO75841 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 ZNF37BP-203ENST00000452306 1352 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 RNU6-374P-201ENST00000364146 108 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 SNORA7.2-201ENST00000364446 145 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 RNU6-335P-201ENST00000364563 113 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 MTND3P20-201ENST00000407663 186 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 UBE2V1P11-201ENST00000411559 285 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AL158825.1-201ENST00000414735 521 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AC245054.1-201ENST00000420944 258 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.93□□□□□ -1.94
UPK1BO75841 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 DPPA2P1-201ENST00000428060 556 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 RSL24D1P8-201ENST00000434442 492 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPK1BO75841 SETP5-201ENST00000437270 562 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 CST9LP2-201ENST00000437612 320 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 FABP5P3-201ENST00000437960 408 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 CYCSP43-201ENST00000438233 310 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 AC004815.1-201ENST00000484185 331 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 RPS27P23-201ENST00000487608 251 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.93□□□□□ -1.94
UPK1BO75841 OR4R3P-201ENST00000525084 838 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 BRD9P1-201ENST00000529855 560 ntBASIC2.93□□□□□ -1.94
UPK1BO75841 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.93□□□□□ -1.94
UPK1BO75841 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.93□□□□□ -1.94
UPK1BO75841 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms