Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 MTND5P24-201ENST00000438892 1767 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 RNU6-553P-201ENST00000364047 96 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 RNU6-356P-201ENST00000384140 107 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 RNU1-44P-201ENST00000384453 163 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 PIGPP2-201ENST00000411569 458 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 USP9YP26-201ENST00000421008 661 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 BMS1P19-201ENST00000433925 393 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF3O43395 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 USP9YP34-201ENST00000453983 808 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 RNU7-125P-201ENST00000458760 62 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 RN7SL738P-201ENST00000470264 297 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 RPS3AP43-201ENST00000479743 781 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.12□□□□□ -1.59
PRPF3O43395 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
PRPF3O43395 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC079587.1-201ENST00000603846 277 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 AL163642.2-201ENST00000604722 1019 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 AL160290.3-201ENST00000604869 165 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC009318.4-201ENST00000620496 486 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC079228.1-201ENST00000624774 1049 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 AC010608.2-201ENST00000624830 470 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF3O43395 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 AC139713.2-215ENST00000641428 5037 ntBASIC5.12□□□□□ -1.59
PRPF3O43395 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PRPF3O43395 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PRPF3O43395 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF3O43395 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PRPF3O43395 MFSD8-242ENST00000641690 4199 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PRPF3O43395 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC008033.1-201ENST00000216407 1162 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC004987.3-201ENST00000413879 771 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF3O43395 OFD1P18Y-201ENST00000420889 959 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 Z99497.1-201ENST00000421282 135 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 ARL4AP3-201ENST00000441452 574 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 PPIAP3-201ENST00000450588 505 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 snoU13.1-201ENST00000459157 104 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AC090453.1-201ENST00000495560 436 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC117522.2-201ENST00000510049 657 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC022882.1-201ENST00000532142 501 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF3O43395 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF3O43395 GSTP1P1-201ENST00000548078 319 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF3O43395 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF3O43395 AC008759.1-201ENST00000589783 983 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 AC008745.1-201ENST00000604064 271 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PRPF3O43395 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AL031667.3-201ENST00000620124 655 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 AC004777.1-201ENST00000624317 287 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF3O43395 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.11□□□□□ -1.59
PRPF3O43395 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PRPF3O43395 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF3O43395 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF3O43395 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms