Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.8□□□□□ -1.8
MSH4O15457 AC073522.1-201ENST00000483312 377 ntBASIC3.8□□□□□ -1.8
MSH4O15457 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.8□□□□□ -1.8
MSH4O15457 MTND2P31-201ENST00000512602 616 ntBASIC3.8□□□□□ -1.8
MSH4O15457 COX6B1P6-201ENST00000522347 255 ntBASIC3.8□□□□□ -1.8
MSH4O15457 AC022790.1-201ENST00000522872 204 ntBASIC3.8□□□□□ -1.8
MSH4O15457 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
MSH4O15457 AC135001.1-201ENST00000544546 283 ntBASIC3.8□□□□□ -1.8
MSH4O15457 AC011611.1-201ENST00000552179 197 ntBASIC3.8□□□□□ -1.8
MSH4O15457 MIR4458-201ENST00000578872 75 ntBASIC3.8□□□□□ -1.8
MSH4O15457 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.8□□□□□ -1.8
MSH4O15457 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.8□□□□□ -1.8
MSH4O15457 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.8□□□□□ -1.8
MSH4O15457 AC004825.2-201ENST00000616634 455 ntBASIC3.8□□□□□ -1.8
MSH4O15457 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.8□□□□□ -1.8
MSH4O15457 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.8□□□□□ -1.8
MSH4O15457 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.8□□□□□ -1.8
MSH4O15457 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 PTMAP5-201ENST00000393073 333 ntBASIC3.79□□□□□ -1.8
MSH4O15457 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 AC004022.2-201ENST00000413824 193 ntBASIC3.79□□□□□ -1.8
MSH4O15457 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 RWDD4P2-201ENST00000426392 563 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AL590762.3-201ENST00000436372 640 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.79□□□□□ -1.8
MSH4O15457 RWDD4P1-201ENST00000488019 565 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.79□□□□□ -1.8
MSH4O15457 AL358832.1-201ENST00000497800 389 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AL035404.1-201ENST00000497982 568 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 PCBP2P3-201ENST00000509726 843 ntBASIC3.79□□□□□ -1.8
MSH4O15457 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.79□□□□□ -1.8
MSH4O15457 AC133963.2-201ENST00000513686 578 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 AP003168.1-201ENST00000530091 307 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.79□□□□□ -1.8
MSH4O15457 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.79□□□□□ -1.8
MSH4O15457 AL162574.2-201ENST00000614618 657 ntBASIC3.79□□□□□ -1.8
MSH4O15457 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 MIR6715B-201ENST00000637172 77 ntBASIC3.79□□□□□ -1.8
MSH4O15457 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 AC022031.1-201ENST00000585985 2593 ntBASIC3.79□□□□□ -1.8
MSH4O15457 CR383658.2-201ENST00000547576 1525 ntBASIC3.79□□□□□ -1.8
MSH4O15457 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
MSH4O15457 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
MSH4O15457 AL049737.1-201ENST00000413920 1403 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 AL133383.2-201ENST00000622958 2336 ntBASIC3.78□□□□□ -1.8
MSH4O15457 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
MSH4O15457 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 RNU1-87P-201ENST00000363727 170 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AL158156.1-201ENST00000422509 473 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AL121882.1-201ENST00000422893 417 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.78□□□□□ -1.8
MSH4O15457 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
MSH4O15457 AC005326.1-201ENST00000429197 123 ntBASIC3.78□□□□□ -1.8
MSH4O15457 PPIAP17-201ENST00000438507 471 ntBASIC3.78□□□□□ -1.8
MSH4O15457 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 AC008264.1-201ENST00000447612 367 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.78□□□□□ -1.8
MSH4O15457 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.78□□□□□ -1.8
MSH4O15457 RPL7P38-201ENST00000488396 739 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC021678.1-201ENST00000505195 936 ntBASIC3.78□□□□□ -1.8
MSH4O15457 MTATP6P22-201ENST00000507369 598 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.78□□□□□ -1.8
MSH4O15457 MIR2276-201ENST00000516886 89 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC008562.1-201ENST00000521763 330 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.78□□□□□ -1.8
MSH4O15457 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.78□□□□□ -1.8
MSH4O15457 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.78□□□□□ -1.8
MSH4O15457 MIR4276-201ENST00000584832 70 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.78□□□□□ -1.8
MSH4O15457 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.78□□□□□ -1.8
MSH4O15457 AC007179.3-201ENST00000604976 235 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AL445493.3-201ENST00000619568 477 ntBASIC3.78□□□□□ -1.8
MSH4O15457 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.78□□□□□ -1.8
MSH4O15457 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.78□□□□□ -1.8
MSH4O15457 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 PNPT1P2-201ENST00000456768 2050 ntBASIC3.78□□□□□ -1.8
MSH4O15457 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
MSH4O15457 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
MSH4O15457 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MSH4O15457 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms