Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL4A3BPQ9Y5P4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 AL031985.4-201ENST00000642138 673 ntBASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL4A3BPQ9Y5P4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 AC116562.2-201ENST00000507042 360 ntBASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL4A3BPQ9Y5P4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 RBM17P1-201ENST00000453646 1190 ntBASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 HLA-A-209ENST00000638375 975 ntBASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL4A3BPQ9Y5P4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 AC211429.1-201ENST00000415277 523 ntBASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 AC004980.1-204ENST00000429707 299 ntBASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 AC026271.3-201ENST00000571884 352 ntBASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
COL4A3BPQ9Y5P4 ZNF815P-204ENST00000434898 1737 ntBASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms