Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 AC008175.2-201ENST00000612840 297 ntBASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 NFIC-211ENST00000641145 8399 ntBASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 AC239859.2-201ENST00000444165 318 ntBASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 AC136469.2-201ENST00000623944 1028 ntBASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 NOC2LP2-201ENST00000407594 1944 ntBASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHTOPQ9Y3Y2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 POU5F1P4-201ENST00000413175 1085 ntBASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.8□□□□□ -0.2
CHTOPQ9Y3Y2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms