Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE7Q9UBL6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 AC005521.1-201ENST00000393351 872 ntBASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE7Q9UBL6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 ECEL1P2-202ENST00000465689 757 ntBASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 RN7SL850P-201ENST00000579959 291 ntBASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 AC092865.7-201ENST00000641832 219 ntBASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE7Q9UBL6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 TMPOP1-202ENST00000424642 1267 ntBASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AL137013.1-201ENST00000432946 1228 ntBASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 CCR12P-201ENST00000446203 998 ntBASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 CKBP1-201ENST00000565489 1086 ntBASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AC116562.4-202ENST00000641738 218 ntBASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE7Q9UBL6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE7Q9UBL6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE7Q9UBL6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms