Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.46■□□□□ 0.23
GCM1Q9NP62 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GCM1Q9NP62 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.46■□□□□ 0.22
GCM1Q9NP62 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GCM1Q9NP62 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
GCM1Q9NP62 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.46■□□□□ 0.22
GCM1Q9NP62 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.46■□□□□ 0.22
GCM1Q9NP62 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 AFG3L1P-217ENST00000557444 2447 ntBASIC16.45■□□□□ 0.22
GCM1Q9NP62 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 NIFKP9-201ENST00000419265 221 ntBASIC16.45■□□□□ 0.22
GCM1Q9NP62 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 AL049637.2-201ENST00000641778 930 ntBASIC16.45■□□□□ 0.22
GCM1Q9NP62 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GCM1Q9NP62 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GCM1Q9NP62 AC020763.4-201ENST00000623414 4170 ntBASIC16.45■□□□□ 0.22
GCM1Q9NP62 BCL2-203ENST00000589955 5011 ntBASIC16.44■□□□□ 0.22
GCM1Q9NP62 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 AC073195.1-201ENST00000607241 877 ntBASIC16.44■□□□□ 0.22
GCM1Q9NP62 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.44■□□□□ 0.22
GCM1Q9NP62 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GCM1Q9NP62 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GCM1Q9NP62 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms