Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPTBN4Q9H254 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 AL049840.3-201ENST00000602669 611 ntBASIC18.4■□□□□ 0.54
SPTBN4Q9H254 AL096865.1-201ENST00000606796 927 ntBASIC18.4■□□□□ 0.54
SPTBN4Q9H254 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 MIR2861-201ENST00000636310 90 ntBASIC18.4■□□□□ 0.54
SPTBN4Q9H254 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 NSUN5P1-202ENST00000421140 1535 ntBASIC18.4■□□□□ 0.54
SPTBN4Q9H254 NSUN5P2-203ENST00000457352 1529 ntBASIC18.4■□□□□ 0.54
SPTBN4Q9H254 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 MIR770-201ENST00000390219 98 ntBASIC18.4■□□□□ 0.54
SPTBN4Q9H254 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SPTBN4Q9H254 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 AL157888.1-201ENST00000631930 593 ntBASIC18.39■□□□□ 0.54
SPTBN4Q9H254 AC104109.2-201ENST00000602919 1418 ntBASIC18.39■□□□□ 0.54
SPTBN4Q9H254 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SPTBN4Q9H254 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 AC242852.2-201ENST00000615738 1807 ntBASIC18.39■□□□□ 0.53
SPTBN4Q9H254 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPTBN4Q9H254 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 AL645939.2-201ENST00000427340 991 ntBASIC18.38■□□□□ 0.53
SPTBN4Q9H254 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 AL391807.1-203ENST00000604392 2365 ntBASIC18.38■□□□□ 0.53
SPTBN4Q9H254 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.38■□□□□ 0.53
SPTBN4Q9H254 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms