Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 AC026271.3-201ENST00000571884 352 ntBASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 AL031985.4-201ENST00000642138 673 ntBASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1EQ9GZS1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 Z85996.1-201ENST00000494644 937 ntBASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 Z99916.2-201ENST00000604037 246 ntBASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 CD177P1-201ENST00000606252 935 ntBASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 AL049637.2-201ENST00000641778 930 ntBASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
POLR1EQ9GZS1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 FAM197Y1-201ENST00000421178 764 ntBASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1EQ9GZS1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 AC113410.3-201ENST00000623366 203 ntBASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1EQ9GZS1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR1EQ9GZS1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR1EQ9GZS1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
POLR1EQ9GZS1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.52■□□□□ 0.71
POLR1EQ9GZS1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.51■□□□□ 0.71
POLR1EQ9GZS1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
POLR1EQ9GZS1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.51■□□□□ 0.71
POLR1EQ9GZS1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1EQ9GZS1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1EQ9GZS1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1EQ9GZS1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms