Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 CRK-204ENST00000574295 1391 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 DLX3-202ENST00000512495 834 ntTSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 OAS3-207ENST00000551007 998 ntTSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LIMD2Q9BT23 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 PHGDH-210ENST00000641115 1638 ntBASIC11.46□□□□□ -0.58
LIMD2Q9BT23 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
LIMD2Q9BT23 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 MIR4758-201ENST00000577688 71 ntBASIC11.45□□□□□ -0.58
LIMD2Q9BT23 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 KRT17P1-201ENST00000399211 1546 ntBASIC11.45□□□□□ -0.58
LIMD2Q9BT23 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC11.45□□□□□ -0.58
LIMD2Q9BT23 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC11.44□□□□□ -0.58
LIMD2Q9BT23 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms