Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 AC069148.1-201ENST00000608741 768 ntBASIC20.48■□□□□ 0.87
ZNF558Q96NG5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 ZNF444P1-201ENST00000559497 298 ntBASIC20.47■□□□□ 0.87
ZNF558Q96NG5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF558Q96NG5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 AL391422.3-201ENST00000603791 2761 ntBASIC20.46■□□□□ 0.87
ZNF558Q96NG5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 HCG4P8-203ENST00000443049 980 ntBASIC20.46■□□□□ 0.87
ZNF558Q96NG5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 MIR4674-201ENST00000582457 87 ntBASIC20.46■□□□□ 0.87
ZNF558Q96NG5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 AC083849.1-201ENST00000615227 514 ntBASIC20.46■□□□□ 0.87
ZNF558Q96NG5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF558Q96NG5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 LINC01311-201ENST00000565162 1445 ntBASIC20.45■□□□□ 0.86
ZNF558Q96NG5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 AC007375.3-201ENST00000600936 2314 ntBASIC20.45■□□□□ 0.86
ZNF558Q96NG5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF558Q96NG5 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.45■□□□□ 0.86
ZNF558Q96NG5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 AL121894.2-201ENST00000602977 491 ntBASIC20.44■□□□□ 0.86
ZNF558Q96NG5 HYMAI.1-201ENST00000620949 238 ntBASIC20.44■□□□□ 0.86
ZNF558Q96NG5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 AC104417.2-201ENST00000562989 1793 ntBASIC20.44■□□□□ 0.86
ZNF558Q96NG5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF558Q96NG5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms