Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 MTDHP1-201ENST00000605323 784 ntBASIC19.66■□□□□ 0.74
RTP4Q96DX8 AC073648.6-201ENST00000641589 218 ntBASIC19.66■□□□□ 0.74
RTP4Q96DX8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 RNF165-205ENST00000588679 2904 ntBASIC19.66■□□□□ 0.74
RTP4Q96DX8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 NBPF21P-201ENST00000425093 1451 ntBASIC19.66■□□□□ 0.74
RTP4Q96DX8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 HLA-A-209ENST00000638375 975 ntBASIC19.65■□□□□ 0.74
RTP4Q96DX8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RTP4Q96DX8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTP4Q96DX8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RTP4Q96DX8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
RTP4Q96DX8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RTP4Q96DX8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTP4Q96DX8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 AC069544.1-201ENST00000609399 999 ntBASIC19.64■□□□□ 0.73
RTP4Q96DX8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTP4Q96DX8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 AL031598.1-201ENST00000561511 1773 ntBASIC19.64■□□□□ 0.73
RTP4Q96DX8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.64■□□□□ 0.73
RTP4Q96DX8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms