Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN23Q96B33 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN23Q96B33 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN23Q96B33 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN23Q96B33 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN23Q96B33 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.27■□□□□ 0.68
CLDN23Q96B33 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 EP400NL-214ENST00000641289 2402 ntBASIC19.26■□□□□ 0.67
CLDN23Q96B33 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 AC023511.2-201ENST00000618803 211 ntBASIC19.26■□□□□ 0.67
CLDN23Q96B33 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN23Q96B33 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN23Q96B33 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AL162741.1-201ENST00000565563 1558 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 AC093525.10-201ENST00000625130 1569 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 CHCHD2P8-201ENST00000429873 447 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 EMBP1-201ENST00000458200 901 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AC004263.2-201ENST00000617183 678 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AC133561.1-201ENST00000568600 2415 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 AC012676.1-201ENST00000574705 1949 ntBASIC19.25■□□□□ 0.67
CLDN23Q96B33 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN23Q96B33 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN23Q96B33 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 AL160237.2-201ENST00000556165 472 ntBASIC19.24■□□□□ 0.67
CLDN23Q96B33 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 AC024243.1-201ENST00000609234 778 ntBASIC19.24■□□□□ 0.67
CLDN23Q96B33 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN23Q96B33 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN23Q96B33 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN23Q96B33 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN23Q96B33 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN23Q96B33 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN23Q96B33 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 HLA-F-220ENST00000434407 884 ntBASIC19.23■□□□□ 0.67
CLDN23Q96B33 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN23Q96B33 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 AL031008.1-201ENST00000619963 541 ntBASIC19.23■□□□□ 0.67
CLDN23Q96B33 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN23Q96B33 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms