Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL049840.3-201ENST00000602669 611 ntBASIC19.64■□□□□ 0.73
TTC28Q96AY4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC28Q96AY4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC28Q96AY4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 AC012645.4-201ENST00000610691 1061 ntBASIC19.63■□□□□ 0.73
TTC28Q96AY4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TTC28Q96AY4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.63■□□□□ 0.73
TTC28Q96AY4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC28Q96AY4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.63■□□□□ 0.73
TTC28Q96AY4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC28Q96AY4 MIR2861-201ENST00000636310 90 ntBASIC19.62■□□□□ 0.73
TTC28Q96AY4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.62■□□□□ 0.73
TTC28Q96AY4 AC036111.1-201ENST00000533973 1582 ntBASIC19.62■□□□□ 0.73
TTC28Q96AY4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC28Q96AY4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TTC28Q96AY4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
TTC28Q96AY4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
TTC28Q96AY4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC28Q96AY4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC28Q96AY4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC28Q96AY4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC28Q96AY4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TTC28Q96AY4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 AL596442.2-201ENST00000610240 980 ntBASIC19.61■□□□□ 0.73
TTC28Q96AY4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC28Q96AY4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TTC28Q96AY4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 COX20P2-201ENST00000452636 358 ntBASIC19.6■□□□□ 0.73
TTC28Q96AY4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 FAM197Y3-203ENST00000618346 717 ntBASIC19.6■□□□□ 0.73
TTC28Q96AY4 FAM215A-202ENST00000632077 792 ntBASIC19.6■□□□□ 0.73
TTC28Q96AY4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 AP005901.3-202ENST00000581653 237 ntBASIC19.6■□□□□ 0.73
TTC28Q96AY4 AC090616.6-201ENST00000582640 721 ntBASIC19.6■□□□□ 0.73
TTC28Q96AY4 AL157888.1-201ENST00000631930 593 ntBASIC19.6■□□□□ 0.73
TTC28Q96AY4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC28Q96AY4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC28Q96AY4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 NSUN5P1-202ENST00000421140 1535 ntBASIC19.59■□□□□ 0.73
TTC28Q96AY4 NSUN5P2-203ENST00000457352 1529 ntBASIC19.59■□□□□ 0.73
TTC28Q96AY4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC28Q96AY4 AL136038.4-201ENST00000603606 1261 ntBASIC19.59■□□□□ 0.73
TTC28Q96AY4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC28Q96AY4 AL035252.4-201ENST00000624174 288 ntBASIC19.59■□□□□ 0.73
TTC28Q96AY4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms