Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 AC079598.2-202ENST00000546624 1451 ntBASIC18.18■□□□□ 0.5
TM9SF4Q92544 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 AC026271.3-201ENST00000571884 352 ntBASIC18.17■□□□□ 0.5
TM9SF4Q92544 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM9SF4Q92544 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
TM9SF4Q92544 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 FSCN1P1-201ENST00000568912 1481 ntBASIC18.16■□□□□ 0.5
TM9SF4Q92544 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 AC113347.1-201ENST00000413321 391 ntBASIC18.16■□□□□ 0.5
TM9SF4Q92544 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.16■□□□□ 0.5
TM9SF4Q92544 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 AP000974.1-201ENST00000623909 2387 ntBASIC18.16■□□□□ 0.5
TM9SF4Q92544 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM9SF4Q92544 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 AL137013.1-201ENST00000432946 1228 ntBASIC18.15■□□□□ 0.5
TM9SF4Q92544 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TM9SF4Q92544 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM9SF4Q92544 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TM9SF4Q92544 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 ARMC10P1-201ENST00000313754 855 ntBASIC18.14■□□□□ 0.49
TM9SF4Q92544 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 C1QL1P1-201ENST00000568105 661 ntBASIC18.14■□□□□ 0.49
TM9SF4Q92544 AL445228.2-201ENST00000605589 952 ntBASIC18.14■□□□□ 0.49
TM9SF4Q92544 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TM9SF4Q92544 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM9SF4Q92544 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms