Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC233702.5-201ENST00000584107 538 ntBASIC20.55■□□□□ 0.88
DDX1Q92499 AL445228.2-201ENST00000605589 952 ntBASIC20.55■□□□□ 0.88
DDX1Q92499 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.55■□□□□ 0.88
DDX1Q92499 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX1Q92499 AL049812.1-201ENST00000432563 2267 ntBASIC20.55■□□□□ 0.88
DDX1Q92499 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX1Q92499 TNXA-203ENST00000507684 2038 ntBASIC20.54■□□□□ 0.88
DDX1Q92499 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDX1Q92499 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDX1Q92499 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.54■□□□□ 0.88
DDX1Q92499 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDX1Q92499 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.54■□□□□ 0.88
DDX1Q92499 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.54■□□□□ 0.88
DDX1Q92499 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
DDX1Q92499 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
DDX1Q92499 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX1Q92499 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX1Q92499 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX1Q92499 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDX1Q92499 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDX1Q92499 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 AC239809.2-201ENST00000415381 517 ntBASIC20.53■□□□□ 0.88
DDX1Q92499 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX1Q92499 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX1Q92499 AC004264.1-201ENST00000608354 794 ntBASIC20.53■□□□□ 0.88
DDX1Q92499 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX1Q92499 AC097493.4-201ENST00000641197 219 ntBASIC20.53■□□□□ 0.88
DDX1Q92499 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.53■□□□□ 0.88
DDX1Q92499 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DDX1Q92499 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX1Q92499 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDX1Q92499 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
DDX1Q92499 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
DDX1Q92499 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.52■□□□□ 0.88
DDX1Q92499 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
DDX1Q92499 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX1Q92499 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
DDX1Q92499 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX1Q92499 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.52■□□□□ 0.87
DDX1Q92499 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDX1Q92499 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.52■□□□□ 0.87
DDX1Q92499 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
DDX1Q92499 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX1Q92499 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
DDX1Q92499 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 KRT16P5-201ENST00000455284 522 ntBASIC20.51■□□□□ 0.87
DDX1Q92499 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX1Q92499 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX1Q92499 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX1Q92499 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 MIR4785-201ENST00000585005 73 ntBASIC20.51■□□□□ 0.87
DDX1Q92499 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
DDX1Q92499 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms