Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 KRT17P6-201ENST00000453795 1220 ntBASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 AL691432.2-201ENST00000607222 2038 ntBASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC00116Q8NCU8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 KRT8P10-201ENST00000450021 1447 ntBASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00116Q8NCU8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 AC004870.1-201ENST00000315132 882 ntBASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.43■■□□□ 1.5
LINC00116Q8NCU8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AC009237.14-201ENST00000609975 1594 ntBASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 BX276092.5-203ENST00000456199 560 ntBASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AL121672.3-201ENST00000608644 468 ntBASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AC024243.1-201ENST00000609234 778 ntBASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC00116Q8NCU8 AC020907.5-201ENST00000624372 1936 ntBASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 AC034232.1-201ENST00000506026 1064 ntBASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 AP002414.4-201ENST00000589764 1148 ntBASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.41■■□□□ 1.5
LINC00116Q8NCU8 GPAT2P1-201ENST00000444924 1672 ntBASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 AC079602.3-201ENST00000623931 403 ntBASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
LINC00116Q8NCU8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms