Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 TSPY15P-201ENST00000457163 923 ntBASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 MIR6786-201ENST00000616843 113 ntBASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH20Q8N6Y1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 UNC93B2-201ENST00000285383 730 ntBASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 RBM17P1-201ENST00000453646 1190 ntBASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 AL160286.2-201ENST00000567150 934 ntBASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH20Q8N6Y1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 MESTP1-201ENST00000404287 994 ntBASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 B3GAT3P1-201ENST00000471720 806 ntBASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 AL020996.1-203ENST00000536896 2307 ntBASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH20Q8N6Y1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDH20Q8N6Y1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH20Q8N6Y1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDH20Q8N6Y1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDH20Q8N6Y1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH20Q8N6Y1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDH20Q8N6Y1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 AC116562.4-201ENST00000641316 2276 ntBASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH20Q8N6Y1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH20Q8N6Y1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDH20Q8N6Y1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH20Q8N6Y1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH20Q8N6Y1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms