Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.21■□□□□ 0.99
NME8Q8N427 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
NME8Q8N427 LINC01238-205ENST00000567549 1107 ntBASIC21.21■□□□□ 0.99
NME8Q8N427 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.21■□□□□ 0.99
NME8Q8N427 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.21■□□□□ 0.99
NME8Q8N427 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NME8Q8N427 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NME8Q8N427 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NME8Q8N427 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NME8Q8N427 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.21■□□□□ 0.99
NME8Q8N427 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.21■□□□□ 0.99
NME8Q8N427 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
NME8Q8N427 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.2■□□□□ 0.98
NME8Q8N427 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.2■□□□□ 0.98
NME8Q8N427 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NME8Q8N427 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.2■□□□□ 0.98
NME8Q8N427 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.2■□□□□ 0.98
NME8Q8N427 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.2■□□□□ 0.98
NME8Q8N427 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NME8Q8N427 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.2■□□□□ 0.98
NME8Q8N427 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NME8Q8N427 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NME8Q8N427 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.2■□□□□ 0.98
NME8Q8N427 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NME8Q8N427 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 AC099778.1-201ENST00000568593 1911 ntBASIC21.19■□□□□ 0.98
NME8Q8N427 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.19■□□□□ 0.98
NME8Q8N427 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 AL391422.3-201ENST00000603791 2761 ntBASIC21.19■□□□□ 0.98
NME8Q8N427 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.19■□□□□ 0.98
NME8Q8N427 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.19■□□□□ 0.98
NME8Q8N427 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 WWOX-216ENST00000569818 525 ntBASIC21.19■□□□□ 0.98
NME8Q8N427 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.19■□□□□ 0.98
NME8Q8N427 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.19■□□□□ 0.98
NME8Q8N427 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NME8Q8N427 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.19■□□□□ 0.98
NME8Q8N427 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NME8Q8N427 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NME8Q8N427 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NME8Q8N427 AL157384.1-201ENST00000445995 2473 ntBASIC21.18■□□□□ 0.98
NME8Q8N427 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.18■□□□□ 0.98
NME8Q8N427 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.18■□□□□ 0.98
NME8Q8N427 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 RNF152P1-201ENST00000397754 604 ntBASIC21.18■□□□□ 0.98
NME8Q8N427 AC117947.1-201ENST00000427448 529 ntBASIC21.18■□□□□ 0.98
NME8Q8N427 AC063952.2-201ENST00000498792 1227 ntBASIC21.18■□□□□ 0.98
NME8Q8N427 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NME8Q8N427 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.18■□□□□ 0.98
NME8Q8N427 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.18■□□□□ 0.98
NME8Q8N427 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.18■□□□□ 0.98
NME8Q8N427 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.18■□□□□ 0.98
NME8Q8N427 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NME8Q8N427 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NME8Q8N427 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NME8Q8N427 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.17■□□□□ 0.98
NME8Q8N427 COX11P1-201ENST00000489116 835 ntBASIC21.17■□□□□ 0.98
NME8Q8N427 AC141257.4-201ENST00000634557 245 ntBASIC21.17■□□□□ 0.98
NME8Q8N427 AC136944.6-201ENST00000634818 245 ntBASIC21.17■□□□□ 0.98
NME8Q8N427 AL031432.5-201ENST00000641059 760 ntBASIC21.17■□□□□ 0.98
NME8Q8N427 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NME8Q8N427 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms