Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
VPS8Q8N3P4 AC073508.3-201ENST00000619697 1419 ntBASIC30.18■■■□□ 2.42
VPS8Q8N3P4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC30.18■■■□□ 2.42
VPS8Q8N3P4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
VPS8Q8N3P4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.18■■■□□ 2.42
VPS8Q8N3P4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.18■■■□□ 2.42
VPS8Q8N3P4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC30.18■■■□□ 2.42
VPS8Q8N3P4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
VPS8Q8N3P4 AC007663.1-201ENST00000438948 1240 ntBASIC30.17■■■□□ 2.42
VPS8Q8N3P4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 KRT18P22-201ENST00000402024 1347 ntBASIC30.17■■■□□ 2.42
VPS8Q8N3P4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
VPS8Q8N3P4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 ECEL1P2-202ENST00000465689 757 ntBASIC30.16■■■□□ 2.42
VPS8Q8N3P4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
VPS8Q8N3P4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 RN7SL850P-201ENST00000579959 291 ntBASIC30.15■■■□□ 2.42
VPS8Q8N3P4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
VPS8Q8N3P4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 TBC1D3P2-202ENST00000577902 1649 ntBASIC30.14■■■□□ 2.42
VPS8Q8N3P4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
VPS8Q8N3P4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC30.14■■■□□ 2.41
VPS8Q8N3P4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 FAM210CP-201ENST00000445714 574 ntBASIC30.13■■■□□ 2.41
VPS8Q8N3P4 AC010203.1-204ENST00000548782 407 ntBASIC30.13■■■□□ 2.41
VPS8Q8N3P4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 MIR4674-201ENST00000582457 87 ntBASIC30.13■■■□□ 2.41
VPS8Q8N3P4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 AC010653.2-201ENST00000623505 997 ntBASIC30.13■■■□□ 2.41
VPS8Q8N3P4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
VPS8Q8N3P4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 CCR12P-201ENST00000446203 998 ntBASIC30.12■■■□□ 2.41
VPS8Q8N3P4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
VPS8Q8N3P4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC30.11■■■□□ 2.41
VPS8Q8N3P4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms