Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 FEM1AP3-201ENST00000403722 1741 ntBASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC01561Q8N1V8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 AL121906.2-201ENST00000621597 723 ntBASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01561Q8N1V8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AP006587.1-201ENST00000534129 1502 ntBASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms