Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
TRIM50Q86XT4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 KRT8P11-201ENST00000409686 1436 ntBASIC21.48■■□□□ 1.03
TRIM50Q86XT4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 AC117947.1-201ENST00000427448 529 ntBASIC21.48■■□□□ 1.03
TRIM50Q86XT4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 AL138966.2-201ENST00000621997 464 ntBASIC21.48■■□□□ 1.03
TRIM50Q86XT4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM50Q86XT4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM50Q86XT4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 AC104417.2-201ENST00000562989 1793 ntBASIC21.46■■□□□ 1.03
TRIM50Q86XT4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM50Q86XT4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
TRIM50Q86XT4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM50Q86XT4 AK4P3-201ENST00000418260 669 ntBASIC21.45■■□□□ 1.02
TRIM50Q86XT4 BX664615.1-201ENST00000443558 458 ntBASIC21.45■■□□□ 1.02
TRIM50Q86XT4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms