Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 PMS2P7-201ENST00000506558 1336 ntBASIC25.07■■□□□ 1.6
BRWD3Q6RI45 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 LSM5-204ENST00000409909 740 ntTSL 2 BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC25.07■■□□□ 1.6
BRWD3Q6RI45 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC25.07■■□□□ 1.6
BRWD3Q6RI45 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 AL031284.1-201ENST00000419297 478 ntBASIC25.06■■□□□ 1.6
BRWD3Q6RI45 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 KRT18P67-201ENST00000432816 1264 ntBASIC25.06■■□□□ 1.6
BRWD3Q6RI45 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.06■■□□□ 1.6
BRWD3Q6RI45 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 AC244015.2-201ENST00000616358 1861 ntBASIC25.05■■□□□ 1.6
BRWD3Q6RI45 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC25.05■■□□□ 1.6
BRWD3Q6RI45 AL691403.2-201ENST00000618460 490 ntBASIC25.05■■□□□ 1.6
BRWD3Q6RI45 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 GPAT2P1-201ENST00000444924 1672 ntBASIC25.04■■□□□ 1.6
BRWD3Q6RI45 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 AC018712.1-201ENST00000455767 687 ntBASIC25.04■■□□□ 1.6
BRWD3Q6RI45 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
BRWD3Q6RI45 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
BRWD3Q6RI45 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 IGHV3-47-201ENST00000425060 335 ntBASIC25.02■■□□□ 1.6
BRWD3Q6RI45 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 AC140113.2-201ENST00000604370 208 ntBASIC25.02■■□□□ 1.6
BRWD3Q6RI45 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 MIR564-202ENST00000385049 94 ntBASIC25.02■■□□□ 1.6
BRWD3Q6RI45 NUS1P2-201ENST00000417358 873 ntBASIC25.02■■□□□ 1.6
BRWD3Q6RI45 FAM197Y8-203ENST00000450145 560 ntBASIC25.02■■□□□ 1.6
BRWD3Q6RI45 MOK-208ENST00000519058 917 ntTSL 2 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.02■■□□□ 1.6
BRWD3Q6RI45 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 FABP5-202ENST00000396359 986 ntTSL 5 BASIC25.01■■□□□ 1.59
BRWD3Q6RI45 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms