Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 CD99P1-205ENST00000527459 561 ntBASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRFN4Q6PJG9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.31■□□□□ 0.36
LRFN4Q6PJG9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 BX323043.1-201ENST00000641006 1765 ntBASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 KRT17P3-201ENST00000420566 1262 ntBASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 AC233263.1-201ENST00000578059 224 ntBASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 AP000974.1-201ENST00000623909 2387 ntBASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRFN4Q6PJG9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 YBX1P10-201ENST00000444752 975 ntBASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 MIR4651-201ENST00000582622 73 ntBASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 MTDHP1-201ENST00000605323 784 ntBASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 AC005082.1-201ENST00000413042 2259 ntBASIC17.29■□□□□ 0.36
LRFN4Q6PJG9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms