Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.57
PCDH1Q08174 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH1Q08174 AC110285.5-201ENST00000611501 352 ntBASIC18.58■□□□□ 0.56
PCDH1Q08174 AL023875.1-201ENST00000640777 796 ntBASIC18.58■□□□□ 0.56
PCDH1Q08174 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH1Q08174 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH1Q08174 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDH1Q08174 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH1Q08174 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH1Q08174 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
PCDH1Q08174 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDH1Q08174 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH1Q08174 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 AC239809.2-201ENST00000415381 517 ntBASIC18.57■□□□□ 0.56
PCDH1Q08174 POU5F1P3-201ENST00000428824 1078 ntBASIC18.57■□□□□ 0.56
PCDH1Q08174 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH1Q08174 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH1Q08174 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH1Q08174 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH1Q08174 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH1Q08174 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH1Q08174 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH1Q08174 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH1Q08174 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH1Q08174 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH1Q08174 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 KRASP1-201ENST00000407852 552 ntBASIC18.56■□□□□ 0.56
PCDH1Q08174 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH1Q08174 AL160286.2-201ENST00000567150 934 ntBASIC18.56■□□□□ 0.56
PCDH1Q08174 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDH1Q08174 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH1Q08174 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH1Q08174 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH1Q08174 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PCDH1Q08174 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDH1Q08174 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH1Q08174 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH1Q08174 AC128676.1-201ENST00000454392 318 ntBASIC18.55■□□□□ 0.56
PCDH1Q08174 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 AC006058.3-201ENST00000606217 1069 ntBASIC18.55■□□□□ 0.56
PCDH1Q08174 AL353708.3-201ENST00000610272 989 ntBASIC18.55■□□□□ 0.56
PCDH1Q08174 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDH1Q08174 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH1Q08174 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH1Q08174 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH1Q08174 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDH1Q08174 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH1Q08174 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH1Q08174 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 AL161938.1-201ENST00000569833 2180 ntBASIC18.54■□□□□ 0.56
PCDH1Q08174 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms