Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VBP1P61758 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.28■□□□□ 0.36
VBP1P61758 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VBP1P61758 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
VBP1P61758 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
VBP1P61758 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.27■□□□□ 0.36
VBP1P61758 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.27■□□□□ 0.36
VBP1P61758 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
VBP1P61758 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.27■□□□□ 0.36
VBP1P61758 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.27■□□□□ 0.36
VBP1P61758 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
VBP1P61758 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VBP1P61758 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.27■□□□□ 0.36
VBP1P61758 AC138907.5-202ENST00000569484 235 ntBASIC17.27■□□□□ 0.36
VBP1P61758 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VBP1P61758 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
VBP1P61758 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VBP1P61758 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VBP1P61758 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.27■□□□□ 0.35
VBP1P61758 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.27■□□□□ 0.35
VBP1P61758 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VBP1P61758 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VBP1P61758 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VBP1P61758 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
VBP1P61758 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.26■□□□□ 0.35
VBP1P61758 AL356652.1-201ENST00000615962 565 ntBASIC17.26■□□□□ 0.35
VBP1P61758 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.26■□□□□ 0.35
VBP1P61758 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VBP1P61758 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.26■□□□□ 0.35
VBP1P61758 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VBP1P61758 AC008764.6-201ENST00000595909 2069 ntBASIC17.25■□□□□ 0.35
VBP1P61758 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
VBP1P61758 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.25■□□□□ 0.35
VBP1P61758 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VBP1P61758 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.25■□□□□ 0.35
VBP1P61758 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
VBP1P61758 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.25■□□□□ 0.35
VBP1P61758 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.25■□□□□ 0.35
VBP1P61758 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.25■□□□□ 0.35
VBP1P61758 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VBP1P61758 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VBP1P61758 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VBP1P61758 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.24■□□□□ 0.35
VBP1P61758 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.24■□□□□ 0.35
VBP1P61758 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
VBP1P61758 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VBP1P61758 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VBP1P61758 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
VBP1P61758 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
VBP1P61758 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.24■□□□□ 0.35
VBP1P61758 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VBP1P61758 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms