Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.73■□□□□ 0.75
CDH4P55283 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH4P55283 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH4P55283 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH4P55283 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH4P55283 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH4P55283 AC096733.2-201ENST00000609937 1394 ntBASIC19.72■□□□□ 0.75
CDH4P55283 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDH4P55283 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH4P55283 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH4P55283 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH4P55283 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CDH4P55283 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH4P55283 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH4P55283 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH4P55283 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH4P55283 SLC25A1P4-201ENST00000567977 778 ntBASIC19.72■□□□□ 0.75
CDH4P55283 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH4P55283 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH4P55283 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH4P55283 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH4P55283 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 Z82202.1-201ENST00000623446 1880 ntBASIC19.71■□□□□ 0.75
CDH4P55283 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDH4P55283 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDH4P55283 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
CDH4P55283 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH4P55283 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 AC087499.1-201ENST00000418141 1075 ntBASIC19.71■□□□□ 0.75
CDH4P55283 CRYGFP-201ENST00000418459 633 ntBASIC19.71■□□□□ 0.75
CDH4P55283 AL390955.1-201ENST00000428694 934 ntBASIC19.71■□□□□ 0.75
CDH4P55283 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH4P55283 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH4P55283 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH4P55283 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CDH4P55283 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH4P55283 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDH4P55283 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH4P55283 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH4P55283 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH4P55283 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH4P55283 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH4P55283 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH4P55283 TSPY21P-201ENST00000433481 731 ntBASIC19.7■□□□□ 0.74
CDH4P55283 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH4P55283 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH4P55283 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH4P55283 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH4P55283 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH4P55283 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDH4P55283 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH4P55283 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH4P55283 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CDH4P55283 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH4P55283 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH4P55283 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CDH4P55283 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH4P55283 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH4P55283 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 MFAP1P1-201ENST00000442257 1255 ntBASIC19.69■□□□□ 0.74
CDH4P55283 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH4P55283 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH4P55283 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH4P55283 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CDH4P55283 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDH4P55283 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH4P55283 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CDH4P55283 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH4P55283 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH4P55283 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 KRT8P11-201ENST00000409686 1436 ntBASIC19.68■□□□□ 0.74
CDH4P55283 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH4P55283 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms