Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 DGCR10-201ENST00000609839 495 ntBASIC21.13■□□□□ 0.97
NCKAP1LP55160 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NCKAP1LP55160 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1LP55160 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1LP55160 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1LP55160 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 RBM17P1-201ENST00000453646 1190 ntBASIC21.12■□□□□ 0.97
NCKAP1LP55160 TSPY15P-201ENST00000457163 923 ntBASIC21.12■□□□□ 0.97
NCKAP1LP55160 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1LP55160 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 AP000692.2-201ENST00000608391 879 ntBASIC21.12■□□□□ 0.97
NCKAP1LP55160 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1LP55160 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1LP55160 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.12■□□□□ 0.97
NCKAP1LP55160 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 TSPY21P-201ENST00000433481 731 ntBASIC21.11■□□□□ 0.97
NCKAP1LP55160 TSPY23P-201ENST00000440136 739 ntBASIC21.11■□□□□ 0.97
NCKAP1LP55160 FAM207BP-201ENST00000447172 505 ntBASIC21.11■□□□□ 0.97
NCKAP1LP55160 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NCKAP1LP55160 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1LP55160 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 AC141586.3-201ENST00000562166 1838 ntBASIC21.1■□□□□ 0.97
NCKAP1LP55160 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1LP55160 KRT8P11-201ENST00000409686 1436 ntBASIC21.1■□□□□ 0.97
NCKAP1LP55160 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.1■□□□□ 0.97
NCKAP1LP55160 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.09■□□□□ 0.97
NCKAP1LP55160 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 AC079598.2-202ENST00000546624 1451 ntBASIC21.09■□□□□ 0.97
NCKAP1LP55160 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NCKAP1LP55160 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NCKAP1LP55160 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.09■□□□□ 0.97
NCKAP1LP55160 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.09■□□□□ 0.97
NCKAP1LP55160 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NCKAP1LP55160 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKAP1LP55160 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCKAP1LP55160 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.08■□□□□ 0.97
NCKAP1LP55160 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms