Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUBP1P53384 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUBP1P53384 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUBP1P53384 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NUBP1P53384 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.18■□□□□ 0.66
NUBP1P53384 AL355385.1-201ENST00000606123 409 ntBASIC19.18■□□□□ 0.66
NUBP1P53384 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUBP1P53384 AC022898.2-201ENST00000616822 1312 ntBASIC19.18■□□□□ 0.66
NUBP1P53384 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.18■□□□□ 0.66
NUBP1P53384 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUBP1P53384 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NUBP1P53384 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NUBP1P53384 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.17■□□□□ 0.66
NUBP1P53384 AC133561.1-201ENST00000568600 2415 ntBASIC19.17■□□□□ 0.66
NUBP1P53384 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.17■□□□□ 0.66
NUBP1P53384 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.17■□□□□ 0.66
NUBP1P53384 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.17■□□□□ 0.66
NUBP1P53384 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.17■□□□□ 0.66
NUBP1P53384 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NUBP1P53384 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
NUBP1P53384 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC19.17■□□□□ 0.66
NUBP1P53384 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.17■□□□□ 0.66
NUBP1P53384 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.17■□□□□ 0.66
NUBP1P53384 AC093909.1-201ENST00000504731 1122 ntBASIC19.17■□□□□ 0.66
NUBP1P53384 RNA5SP419-201ENST00000515908 135 ntBASIC19.17■□□□□ 0.66
NUBP1P53384 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.17■□□□□ 0.66
NUBP1P53384 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NUBP1P53384 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUBP1P53384 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.17■□□□□ 0.66
NUBP1P53384 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.16■□□□□ 0.66
NUBP1P53384 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NUBP1P53384 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NUBP1P53384 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.16■□□□□ 0.66
NUBP1P53384 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 AC005104.2-201ENST00000427818 678 ntBASIC19.16■□□□□ 0.66
NUBP1P53384 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.16■□□□□ 0.66
NUBP1P53384 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 REXO1L6P-202ENST00000619970 1078 ntBASIC19.16■□□□□ 0.66
NUBP1P53384 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.16■□□□□ 0.66
NUBP1P53384 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NUBP1P53384 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
NUBP1P53384 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUBP1P53384 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 AL355994.1-201ENST00000424379 260 ntBASIC19.15■□□□□ 0.66
NUBP1P53384 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.15■□□□□ 0.66
NUBP1P53384 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.15■□□□□ 0.66
NUBP1P53384 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 MIR4674-201ENST00000582457 87 ntBASIC19.15■□□□□ 0.66
NUBP1P53384 Z69720.1-201ENST00000601483 472 ntBASIC19.15■□□□□ 0.66
NUBP1P53384 TERC-201ENST00000602385 541 ntBASIC19.15■□□□□ 0.66
NUBP1P53384 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NUBP1P53384 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.15■□□□□ 0.66
NUBP1P53384 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NUBP1P53384 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUBP1P53384 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NUBP1P53384 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NUBP1P53384 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NUBP1P53384 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.14■□□□□ 0.66
NUBP1P53384 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.14■□□□□ 0.65
NUBP1P53384 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NUBP1P53384 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.14■□□□□ 0.65
NUBP1P53384 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.14■□□□□ 0.65
NUBP1P53384 YY1P1-201ENST00000427625 668 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms