Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC25A1P53007 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
SLC25A1P53007 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 FEM1AP3-201ENST00000403722 1741 ntBASIC17.13■□□□□ 0.33
SLC25A1P53007 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SLC25A1P53007 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC25A1P53007 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC25A1P53007 SOX15-203ENST00000570788 1093 ntBASIC17.12■□□□□ 0.33
SLC25A1P53007 AC008687.6-201ENST00000596318 630 ntBASIC17.12■□□□□ 0.33
SLC25A1P53007 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC25A1P53007 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC25A1P53007 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SLC25A1P53007 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 Z98044.1-201ENST00000632503 1764 ntBASIC17.12■□□□□ 0.33
SLC25A1P53007 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC25A1P53007 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC25A1P53007 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC25A1P53007 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC25A1P53007 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC25A1P53007 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC25A1P53007 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC25A1P53007 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC25A1P53007 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC25A1P53007 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC25A1P53007 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC25A1P53007 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC25A1P53007 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SLC25A1P53007 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC25A1P53007 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC25A1P53007 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC25A1P53007 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC25A1P53007 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC25A1P53007 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC25A1P53007 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC25A1P53007 AL138781.1-201ENST00000566567 1274 ntBASIC17.1■□□□□ 0.33
SLC25A1P53007 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC25A1P53007 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC25A1P53007 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC25A1P53007 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC25A1P53007 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC25A1P53007 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC25A1P53007 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SLC25A1P53007 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms