Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.17■□□□□ 0.66
CTSKP43235 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSKP43235 SLC25A1P2-201ENST00000430693 912 ntBASIC19.17■□□□□ 0.66
CTSKP43235 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.17■□□□□ 0.66
CTSKP43235 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 AC091390.4-202ENST00000476426 537 ntBASIC19.17■□□□□ 0.66
CTSKP43235 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.17■□□□□ 0.66
CTSKP43235 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.17■□□□□ 0.66
CTSKP43235 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.17■□□□□ 0.66
CTSKP43235 LINC01238-205ENST00000567549 1107 ntBASIC19.17■□□□□ 0.66
CTSKP43235 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CTSKP43235 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CTSKP43235 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSKP43235 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTSKP43235 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 AC073314.1-201ENST00000568729 2216 ntBASIC19.16■□□□□ 0.66
CTSKP43235 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTSKP43235 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CTSKP43235 Z85996.1-201ENST00000494644 937 ntBASIC19.16■□□□□ 0.66
CTSKP43235 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.16■□□□□ 0.66
CTSKP43235 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.16■□□□□ 0.66
CTSKP43235 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.16■□□□□ 0.66
CTSKP43235 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.16■□□□□ 0.66
CTSKP43235 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSKP43235 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSKP43235 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.16■□□□□ 0.66
CTSKP43235 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CTSKP43235 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSKP43235 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSKP43235 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CTSKP43235 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTSKP43235 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CTSKP43235 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.15■□□□□ 0.66
CTSKP43235 AC010653.2-201ENST00000623505 997 ntBASIC19.15■□□□□ 0.66
CTSKP43235 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSKP43235 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSKP43235 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSKP43235 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTSKP43235 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSKP43235 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CTSKP43235 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTSKP43235 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.14■□□□□ 0.66
CTSKP43235 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CTSKP43235 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSKP43235 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSKP43235 FAM8A6P-201ENST00000407496 1135 ntBASIC19.14■□□□□ 0.65
CTSKP43235 AC007663.1-201ENST00000438948 1240 ntBASIC19.14■□□□□ 0.65
CTSKP43235 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CTSKP43235 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.14■□□□□ 0.65
CTSKP43235 AC139887.4-201ENST00000607877 719 ntBASIC19.14■□□□□ 0.65
CTSKP43235 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CTSKP43235 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CTSKP43235 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTSKP43235 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSKP43235 SMG8-203ENST00000578922 2178 ntBASIC19.14■□□□□ 0.65
CTSKP43235 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTSKP43235 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSKP43235 KRT8P8-201ENST00000434750 1448 ntBASIC19.14■□□□□ 0.65
CTSKP43235 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTSKP43235 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.14■□□□□ 0.65
CTSKP43235 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSKP43235 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSKP43235 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.14■□□□□ 0.65
CTSKP43235 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.14■□□□□ 0.65
CTSKP43235 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTSKP43235 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
CTSKP43235 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTSKP43235 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTSKP43235 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSKP43235 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.13■□□□□ 0.65
CTSKP43235 PCDHAC2-203ENST00000615316 3011 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms