Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT20P35900 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT20P35900 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
KRT20P35900 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT20P35900 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 POM121L13P-201ENST00000422362 380 ntBASIC18.29■□□□□ 0.52
KRT20P35900 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
KRT20P35900 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT20P35900 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT20P35900 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT20P35900 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 AC026471.1-201ENST00000564629 3026 ntBASIC18.29■□□□□ 0.52
KRT20P35900 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT20P35900 AP001271.2-201ENST00000624018 1556 ntBASIC18.29■□□□□ 0.52
KRT20P35900 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRT20P35900 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KRT20P35900 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT20P35900 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT20P35900 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KRT20P35900 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT20P35900 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.28■□□□□ 0.52
KRT20P35900 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
KRT20P35900 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 FAM201B-201ENST00000458407 597 ntBASIC18.28■□□□□ 0.52
KRT20P35900 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT20P35900 PRKY-204ENST00000533551 1019 ntBASIC18.28■□□□□ 0.52
KRT20P35900 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT20P35900 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT20P35900 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
KRT20P35900 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
KRT20P35900 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT20P35900 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KRT20P35900 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT20P35900 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT20P35900 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KRT20P35900 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT20P35900 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.27■□□□□ 0.52
KRT20P35900 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT20P35900 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT20P35900 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT20P35900 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT20P35900 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT20P35900 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
KRT20P35900 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT20P35900 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT20P35900 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT20P35900 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT20P35900 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT20P35900 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT20P35900 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms