Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 INGX-201ENST00000359239 846 ntBASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 TSPY17P-201ENST00000450329 467 ntBASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 CA15P1-201ENST00000481698 905 ntBASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40ALP0C0E4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB40ALP0C0E4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 AL162377.1-201ENST00000618844 1793 ntBASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40ALP0C0E4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 AC007663.1-201ENST00000438948 1240 ntBASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 AL023803.3-201ENST00000615559 522 ntBASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 AC006011.2-201ENST00000621313 1158 ntBASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 AC092338.2-201ENST00000568827 1415 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms