Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.77■■□□□ 1.4
CSF1RP07333 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CSF1RP07333 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.77■■□□□ 1.4
CSF1RP07333 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.77■■□□□ 1.4
CSF1RP07333 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CSF1RP07333 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.77■■□□□ 1.4
CSF1RP07333 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSF1RP07333 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.76■■□□□ 1.39
CSF1RP07333 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CSF1RP07333 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSF1RP07333 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSF1RP07333 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.76■■□□□ 1.39
CSF1RP07333 TSPY21P-201ENST00000433481 731 ntBASIC23.76■■□□□ 1.39
CSF1RP07333 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.76■■□□□ 1.39
CSF1RP07333 YBX1P2-201ENST00000489612 999 ntBASIC23.76■■□□□ 1.39
CSF1RP07333 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSF1RP07333 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSF1RP07333 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CSF1RP07333 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.76■■□□□ 1.39
CSF1RP07333 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.76■■□□□ 1.39
CSF1RP07333 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSF1RP07333 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSF1RP07333 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.75■■□□□ 1.39
CSF1RP07333 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.75■■□□□ 1.39
CSF1RP07333 COX11P1-201ENST00000489116 835 ntBASIC23.75■■□□□ 1.39
CSF1RP07333 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.75■■□□□ 1.39
CSF1RP07333 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CSF1RP07333 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.75■■□□□ 1.39
CSF1RP07333 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.75■■□□□ 1.39
CSF1RP07333 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.75■■□□□ 1.39
CSF1RP07333 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 KRT8P45-201ENST00000414328 1447 ntBASIC23.75■■□□□ 1.39
CSF1RP07333 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.75■■□□□ 1.39
CSF1RP07333 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
CSF1RP07333 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSF1RP07333 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CSF1RP07333 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.74■■□□□ 1.39
CSF1RP07333 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.74■■□□□ 1.39
CSF1RP07333 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 RNF152P1-201ENST00000397754 604 ntBASIC23.74■■□□□ 1.39
CSF1RP07333 FAM8A6P-201ENST00000407496 1135 ntBASIC23.74■■□□□ 1.39
CSF1RP07333 AL512604.3-201ENST00000569583 964 ntBASIC23.74■■□□□ 1.39
CSF1RP07333 AC011558.1-201ENST00000623459 338 ntBASIC23.74■■□□□ 1.39
CSF1RP07333 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.74■■□□□ 1.39
CSF1RP07333 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSF1RP07333 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.74■■□□□ 1.39
CSF1RP07333 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.74■■□□□ 1.39
CSF1RP07333 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.74■■□□□ 1.39
CSF1RP07333 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CSF1RP07333 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CSF1RP07333 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.73■■□□□ 1.39
CSF1RP07333 AC022616.7-201ENST00000525383 220 ntBASIC23.73■■□□□ 1.39
CSF1RP07333 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.73■■□□□ 1.39
CSF1RP07333 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.73■■□□□ 1.39
CSF1RP07333 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CSF1RP07333 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CSF1RP07333 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CSF1RP07333 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSF1RP07333 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.72■■□□□ 1.39
CSF1RP07333 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.72■■□□□ 1.39
CSF1RP07333 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms