Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
OPHN1O60890 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPHN1O60890 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
OPHN1O60890 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.09■□□□□ 0.81
OPHN1O60890 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPHN1O60890 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPHN1O60890 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
OPHN1O60890 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.09■□□□□ 0.81
OPHN1O60890 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.08■□□□□ 0.81
OPHN1O60890 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.08■□□□□ 0.81
OPHN1O60890 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
OPHN1O60890 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
OPHN1O60890 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
OPHN1O60890 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
OPHN1O60890 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
OPHN1O60890 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
OPHN1O60890 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
OPHN1O60890 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.08■□□□□ 0.81
OPHN1O60890 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.08■□□□□ 0.81
OPHN1O60890 RARRES2P10-201ENST00000564312 460 ntBASIC20.08■□□□□ 0.81
OPHN1O60890 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.08■□□□□ 0.81
OPHN1O60890 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.08■□□□□ 0.81
OPHN1O60890 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.08■□□□□ 0.81
OPHN1O60890 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
OPHN1O60890 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
OPHN1O60890 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
OPHN1O60890 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
OPHN1O60890 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.08■□□□□ 0.8
OPHN1O60890 TFP1-202ENST00000475455 1573 ntBASIC20.08■□□□□ 0.8
OPHN1O60890 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
OPHN1O60890 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
OPHN1O60890 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
OPHN1O60890 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 AC005332.7-201ENST00000614046 2005 ntBASIC20.07■□□□□ 0.8
OPHN1O60890 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
OPHN1O60890 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
OPHN1O60890 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 RCN1P1-201ENST00000400413 996 ntBASIC20.07■□□□□ 0.8
OPHN1O60890 TSPY15P-201ENST00000457163 923 ntBASIC20.07■□□□□ 0.8
OPHN1O60890 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.07■□□□□ 0.8
OPHN1O60890 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.07■□□□□ 0.8
OPHN1O60890 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.07■□□□□ 0.8
OPHN1O60890 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.07■□□□□ 0.8
OPHN1O60890 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.07■□□□□ 0.8
OPHN1O60890 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
OPHN1O60890 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.07■□□□□ 0.8
OPHN1O60890 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
OPHN1O60890 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
OPHN1O60890 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
OPHN1O60890 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.06■□□□□ 0.8
OPHN1O60890 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
OPHN1O60890 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
OPHN1O60890 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
OPHN1O60890 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
OPHN1O60890 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.06■□□□□ 0.8
OPHN1O60890 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.06■□□□□ 0.8
OPHN1O60890 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
OPHN1O60890 AL355075.4-201ENST00000554988 638 ntBASIC20.06■□□□□ 0.8
OPHN1O60890 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.06■□□□□ 0.8
OPHN1O60890 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
OPHN1O60890 AC006557.6-201ENST00000623071 864 ntBASIC20.06■□□□□ 0.8
OPHN1O60890 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
OPHN1O60890 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
OPHN1O60890 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
OPHN1O60890 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.06■□□□□ 0.8
OPHN1O60890 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
OPHN1O60890 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
OPHN1O60890 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.05■□□□□ 0.8
OPHN1O60890 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.05■□□□□ 0.8
OPHN1O60890 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
OPHN1O60890 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
OPHN1O60890 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.05■□□□□ 0.8
OPHN1O60890 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms