Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 DGCR10-201ENST00000609839 495 ntBASIC18.52■□□□□ 0.56
PRICKLE3O43900 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRICKLE3O43900 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRICKLE3O43900 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE3O43900 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE3O43900 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PRICKLE3O43900 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRICKLE3O43900 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRICKLE3O43900 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRICKLE3O43900 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRICKLE3O43900 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 UNC93B2-201ENST00000285383 730 ntBASIC18.49■□□□□ 0.55
PRICKLE3O43900 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 FAM207BP-201ENST00000447172 505 ntBASIC18.49■□□□□ 0.55
PRICKLE3O43900 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRICKLE3O43900 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.49■□□□□ 0.55
PRICKLE3O43900 KRT8P11-201ENST00000409686 1436 ntBASIC18.49■□□□□ 0.55
PRICKLE3O43900 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms