Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC28A2O43868 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
SLC28A2O43868 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC28A2O43868 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC28A2O43868 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC28A2O43868 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC28A2O43868 AC079598.2-202ENST00000546624 1451 ntBASIC18.54■□□□□ 0.56
SLC28A2O43868 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 AL390719.1-204ENST00000412397 1219 ntBASIC18.54■□□□□ 0.56
SLC28A2O43868 SLC25A3P1-201ENST00000443844 931 ntBASIC18.54■□□□□ 0.56
SLC28A2O43868 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC28A2O43868 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC28A2O43868 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.54■□□□□ 0.56
SLC28A2O43868 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
SLC28A2O43868 AC091076.1-201ENST00000610741 619 ntBASIC18.54■□□□□ 0.56
SLC28A2O43868 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC28A2O43868 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC28A2O43868 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC28A2O43868 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 AC073508.3-201ENST00000619697 1419 ntBASIC18.54■□□□□ 0.56
SLC28A2O43868 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
SLC28A2O43868 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SLC28A2O43868 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC28A2O43868 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC28A2O43868 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC28A2O43868 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 HLA-G-202ENST00000376815 851 ntBASIC18.53■□□□□ 0.56
SLC28A2O43868 HLA-G-203ENST00000376818 1127 ntBASIC18.53■□□□□ 0.56
SLC28A2O43868 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC28A2O43868 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC28A2O43868 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC28A2O43868 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC28A2O43868 AC005829.2-201ENST00000571422 1056 ntBASIC18.53■□□□□ 0.56
SLC28A2O43868 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC28A2O43868 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC28A2O43868 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC28A2O43868 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC28A2O43868 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC28A2O43868 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SLC28A2O43868 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC28A2O43868 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC28A2O43868 AC026396.1-201ENST00000419388 421 ntBASIC18.52■□□□□ 0.56
SLC28A2O43868 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC28A2O43868 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC28A2O43868 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC28A2O43868 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC28A2O43868 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC28A2O43868 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC28A2O43868 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A2O43868 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC28A2O43868 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC28A2O43868 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.52■□□□□ 0.55
SLC28A2O43868 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
SLC28A2O43868 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC28A2O43868 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 AC009237.14-201ENST00000609975 1594 ntBASIC18.51■□□□□ 0.55
SLC28A2O43868 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC28A2O43868 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SLC28A2O43868 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC28A2O43868 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A2O43868 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms