Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CASQ2O14958 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CASQ2O14958 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.31■□□□□ 0.52
CASQ2O14958 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.3■□□□□ 0.52
CASQ2O14958 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CASQ2O14958 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.3■□□□□ 0.52
CASQ2O14958 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CASQ2O14958 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.3■□□□□ 0.52
CASQ2O14958 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CASQ2O14958 AC007322.3-201ENST00000426526 701 ntBASIC18.3■□□□□ 0.52
CASQ2O14958 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.3■□□□□ 0.52
CASQ2O14958 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CASQ2O14958 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CASQ2O14958 KRT16P6-202ENST00000425692 1426 ntBASIC18.3■□□□□ 0.52
CASQ2O14958 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASQ2O14958 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CASQ2O14958 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.29■□□□□ 0.52
CASQ2O14958 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.29■□□□□ 0.52
CASQ2O14958 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CASQ2O14958 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CASQ2O14958 KRT8P17-201ENST00000453110 1448 ntBASIC18.29■□□□□ 0.52
CASQ2O14958 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
CASQ2O14958 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
CASQ2O14958 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASQ2O14958 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CASQ2O14958 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CASQ2O14958 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CASQ2O14958 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CASQ2O14958 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 AC091799.1-201ENST00000422823 811 ntBASIC18.28■□□□□ 0.52
CASQ2O14958 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CASQ2O14958 AC138907.5-202ENST00000569484 235 ntBASIC18.28■□□□□ 0.52
CASQ2O14958 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.28■□□□□ 0.52
CASQ2O14958 AC120498.10-201ENST00000621827 505 ntBASIC18.28■□□□□ 0.52
CASQ2O14958 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.28■□□□□ 0.52
CASQ2O14958 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.28■□□□□ 0.52
CASQ2O14958 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CASQ2O14958 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CASQ2O14958 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASQ2O14958 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.27■□□□□ 0.52
CASQ2O14958 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.27■□□□□ 0.52
CASQ2O14958 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.27■□□□□ 0.52
CASQ2O14958 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.27■□□□□ 0.52
CASQ2O14958 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CASQ2O14958 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.27■□□□□ 0.52
CASQ2O14958 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.27■□□□□ 0.52
CASQ2O14958 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms