Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SART3-203ENST00000546611 1184 ntBASIC33.05■■■□□ 2.88
CUX2O14529 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC33.05■■■□□ 2.88
CUX2O14529 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
CUX2O14529 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 TK1-205ENST00000590862 642 ntTSL 3 BASIC33.05■■■□□ 2.88
CUX2O14529 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC33.05■■■□□ 2.88
CUX2O14529 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC33.05■■■□□ 2.88
CUX2O14529 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC33.05■■■□□ 2.88
CUX2O14529 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
CUX2O14529 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CUX2O14529 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CUX2O14529 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC33.04■■■□□ 2.88
CUX2O14529 CALY-203ENST00000368558 825 ntTSL 5 BASIC33.04■■■□□ 2.88
CUX2O14529 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CUX2O14529 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
CUX2O14529 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC33.04■■■□□ 2.88
CUX2O14529 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CUX2O14529 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC33.03■■■□□ 2.88
CUX2O14529 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC33.03■■■□□ 2.88
CUX2O14529 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC33.03■■■□□ 2.88
CUX2O14529 HLA-F-220ENST00000434407 884 ntBASIC33.03■■■□□ 2.88
CUX2O14529 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC33.03■■■□□ 2.88
CUX2O14529 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
CUX2O14529 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC33.03■■■□□ 2.88
CUX2O14529 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC33.03■■■□□ 2.88
CUX2O14529 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC33.03■■■□□ 2.88
CUX2O14529 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
CUX2O14529 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
CUX2O14529 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC33.02■■■□□ 2.88
CUX2O14529 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC33.02■■■□□ 2.88
CUX2O14529 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CUX2O14529 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC33.01■■■□□ 2.88
CUX2O14529 MYB-221ENST00000527615 2381 ntTSL 5 BASIC33.01■■■□□ 2.88
CUX2O14529 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CUX2O14529 AC099336.1-202ENST00000602961 463 ntBASIC33.01■■■□□ 2.88
CUX2O14529 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC33.01■■■□□ 2.88
CUX2O14529 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CUX2O14529 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CUX2O14529 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
CUX2O14529 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CUX2O14529 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC33.01■■■□□ 2.87
CUX2O14529 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CUX2O14529 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CUX2O14529 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC33■■■□□ 2.87
CUX2O14529 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC33■■■□□ 2.87
CUX2O14529 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CUX2O14529 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC33■■■□□ 2.87
CUX2O14529 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC33■■■□□ 2.87
CUX2O14529 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC33■■■□□ 2.87
CUX2O14529 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CUX2O14529 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CUX2O14529 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CUX2O14529 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC33■■■□□ 2.87
CUX2O14529 MIR940-201ENST00000401276 94 ntBASIC32.99■■■□□ 2.87
CUX2O14529 FAM197Y8-203ENST00000450145 560 ntBASIC32.99■■■□□ 2.87
CUX2O14529 RPL13AP23-201ENST00000480739 586 ntBASIC32.99■■■□□ 2.87
CUX2O14529 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC32.99■■■□□ 2.87
CUX2O14529 MIR4674-201ENST00000582457 87 ntBASIC32.99■■■□□ 2.87
CUX2O14529 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CUX2O14529 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CUX2O14529 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
CUX2O14529 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CUX2O14529 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CUX2O14529 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC32.99■■■□□ 2.87
CUX2O14529 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CUX2O14529 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC32.99■■■□□ 2.87
CUX2O14529 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC32.99■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms