Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 INGX-201ENST00000359239 846 ntBASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC010203.1-204ENST00000548782 407 ntBASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL049597.2-201ENST00000565575 961 ntBASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 KRT8P11-201ENST00000409686 1436 ntBASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC092338.2-201ENST00000568827 1415 ntBASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC007663.1-201ENST00000438948 1240 ntBASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL353719.1-201ENST00000566847 864 ntBASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.29■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL512604.3-201ENST00000569583 964 ntBASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL023803.3-201ENST00000615559 522 ntBASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AL590326.2-201ENST00000625139 305 ntBASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms