Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC079598.2-202ENST00000546624 1451 ntBASIC15.22■□□□□ 0.03
LINC01548A6NM66 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 KRT8P41-201ENST00000533985 1514 ntBASIC15.22■□□□□ 0.03
LINC01548A6NM66 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 RBM17P1-201ENST00000453646 1190 ntBASIC15.21■□□□□ 0.03
LINC01548A6NM66 AC091390.4-202ENST00000476426 537 ntBASIC15.21■□□□□ 0.03
LINC01548A6NM66 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01548A6NM66 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01548A6NM66 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01548A6NM66 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01548A6NM66 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.21■□□□□ 0.02
LINC01548A6NM66 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
LINC01548A6NM66 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
LINC01548A6NM66 FSCN1P1-201ENST00000568912 1481 ntBASIC15.2■□□□□ 0.02
LINC01548A6NM66 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.2■□□□□ 0.02
LINC01548A6NM66 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 AP000525.1-201ENST00000608286 694 ntBASIC15.2■□□□□ 0.02
LINC01548A6NM66 AC011298.2-201ENST00000617989 482 ntBASIC15.2■□□□□ 0.02
LINC01548A6NM66 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LINC01548A6NM66 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01548A6NM66 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 AC004951.3-201ENST00000418645 1148 ntBASIC15.19■□□□□ 0.02
LINC01548A6NM66 AL390955.1-201ENST00000428694 934 ntBASIC15.19■□□□□ 0.02
LINC01548A6NM66 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 AC026271.3-201ENST00000571884 352 ntBASIC15.19■□□□□ 0.02
LINC01548A6NM66 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms