Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC027796.2-201ENST00000575326 344 ntBASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 AL391807.1-203ENST00000604392 2365 ntBASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TMEM88BA6NKF7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 AC090616.6-201ENST00000582640 721 ntBASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM88BA6NKF7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 FAM197Y8-203ENST00000450145 560 ntBASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 AL049796.1-201ENST00000565336 1766 ntBASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 AC233702.3-201ENST00000578656 1387 ntBASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEM88BA6NKF7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 Z69720.1-201ENST00000601483 472 ntBASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 AC140113.2-201ENST00000604370 208 ntBASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM88BA6NKF7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 AC093909.1-201ENST00000504731 1122 ntBASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 AL157888.1-201ENST00000631930 593 ntBASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.42■■□□□ 1.18
TMEM88BA6NKF7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.41■■□□□ 1.18
TMEM88BA6NKF7 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms