Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 MIR3652-201ENST00000579335 131 ntBASIC22.53■■□□□ 1.2
SSC5DA1L4H1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SSC5DA1L4H1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 AC016734.2-201ENST00000624325 1377 ntBASIC22.52■■□□□ 1.2
SSC5DA1L4H1 AP005212.1-201ENST00000581547 1997 ntBASIC22.52■■□□□ 1.2
SSC5DA1L4H1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 AC036111.1-201ENST00000533973 1582 ntBASIC22.52■■□□□ 1.2
SSC5DA1L4H1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 GPAT2P1-201ENST00000444924 1672 ntBASIC22.52■■□□□ 1.2
SSC5DA1L4H1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.52■■□□□ 1.2
SSC5DA1L4H1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
SSC5DA1L4H1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 TSSC2-201ENST00000450217 709 ntBASIC22.51■■□□□ 1.19
SSC5DA1L4H1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 AC111152.3-201ENST00000569699 673 ntBASIC22.51■■□□□ 1.19
SSC5DA1L4H1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.51■■□□□ 1.19
SSC5DA1L4H1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 AC092329.2-201ENST00000598402 547 ntBASIC22.5■■□□□ 1.19
SSC5DA1L4H1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.5■■□□□ 1.19
SSC5DA1L4H1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SSC5DA1L4H1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 KRT8P10-201ENST00000450021 1447 ntBASIC22.49■■□□□ 1.19
SSC5DA1L4H1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SSC5DA1L4H1 AC104417.2-201ENST00000562989 1793 ntBASIC22.49■■□□□ 1.19
SSC5DA1L4H1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 AL845331.1-201ENST00000424978 1190 ntBASIC22.48■■□□□ 1.19
SSC5DA1L4H1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 AC073314.1-201ENST00000568729 2216 ntBASIC22.48■■□□□ 1.19
SSC5DA1L4H1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms