Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC233266.2-201ENST00000567067 528 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AGGF1P6-201ENST00000569213 976 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC008687.2-201ENST00000597865 520 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 FRG1HP-204ENST00000617940 757 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 OR6C71P-202ENST00000641886 1107 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC021755.1-201ENST00000559747 1447 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 MTND5P11-201ENST00000511037 1812 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RPL7P26-201ENST00000333817 754 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-1151P-201ENST00000384684 107 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 FABP12P1-201ENST00000401911 322 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 SNORA11C-201ENST00000408532 129 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 TOMM22P1-201ENST00000418578 312 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL035407.2-201ENST00000454090 378 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 snoU13.24-201ENST00000458998 104 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC133963.2-201ENST00000513686 578 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC104057.1-201ENST00000515547 497 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RNU1-61P-201ENST00000516107 151 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RNA5SP468-201ENST00000516782 93 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-352P-201ENST00000516908 107 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 MIR2116-201ENST00000517221 80 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL163153.1-201ENST00000554223 283 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 EIF5A2P1-201ENST00000564027 460 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 MIR4738-201ENST00000579134 87 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL355812.1-201ENST00000603215 216 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC103881.1-201ENST00000603476 538 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 SNORA62.6-201ENST00000606322 83 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL354760.1-201ENST00000608357 643 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AP001033.2-201ENST00000609701 1003 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL162233.1-201ENST00000620014 944 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AC118273.1-201ENST00000525324 3006 ntBASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDD3Q9Y3P4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 ZNF602P-201ENST00000405929 924 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 RNU4-65P-201ENST00000410473 140 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-628P-201ENST00000410675 107 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 HMGB3P23-201ENST00000414981 585 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC127526.1-201ENST00000417526 366 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 PNRC2P1-201ENST00000423940 420 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC093422.3-201ENST00000428506 305 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 ETF1P3-201ENST00000430422 1160 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC005189.1-201ENST00000431286 310 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 PTGES3P5-201ENST00000455109 434 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC015724.1-201ENST00000478577 156 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC012181.1-201ENST00000479895 423 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 RN7SL323P-201ENST00000494712 295 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC010460.1-201ENST00000507087 466 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC104108.1-201ENST00000509930 412 ntBASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.25□□□□□ -1.89
RHBDD3Q9Y3P4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms