Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 AC022034.1-201ENST00000512867 2156 ntBASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
TRIM35Q9UPQ4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AP001541.1-201ENST00000623322 1904 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RN7SKP187-201ENST00000365536 330 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 MIR215-201ENST00000384858 110 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC092651.1-201ENST00000426110 312 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RPL23AP69-201ENST00000431134 458 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RPL23AP19-201ENST00000436229 369 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RPL23AP22-201ENST00000437556 453 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 PPIAP10-201ENST00000438675 458 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RANP2-201ENST00000456833 229 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RN7SL168P-201ENST00000463821 279 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC087477.1-201ENST00000465747 340 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 DYNLL1P5-201ENST00000467158 270 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AP000797.2-201ENST00000475768 606 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC093267.1-201ENST00000489176 961 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RPS23P5-201ENST00000495419 428 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 TBCAP3-201ENST00000512475 312 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-844P-201ENST00000517175 102 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 IGKV3D-25-201ENST00000519599 235 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC084121.1-201ENST00000533882 835 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC090115.3-201ENST00000553218 849 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AL078605.1-201ENST00000603529 500 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC091193.1-201ENST00000604640 448 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AC008162.1-201ENST00000604718 254 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AL670379.4-201ENST00000605279 254 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 AL359976.1-201ENST00000418655 3528 ntBASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM35Q9UPQ4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 SNORA53-201ENST00000391141 249 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 RNU6-394P-201ENST00000410735 107 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 RNU2-18P-201ENST00000411224 162 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AL158071.1-201ENST00000430315 461 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 HSPA8P18-201ENST00000439846 1928 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 RPL5P7-201ENST00000444235 813 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC118758.1-202ENST00000454719 225 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 YWHAEP4-201ENST00000505390 198 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 FTH1P21-201ENST00000512179 511 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 Y_RNA.710-201ENST00000516975 110 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 RN7SKP35-201ENST00000517210 151 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC034114.1-201ENST00000520293 285 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC090751.1-201ENST00000566966 267 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 MRPS21P8-201ENST00000569196 235 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC025034.2-201ENST00000623264 286 ntBASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM35Q9UPQ4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM35Q9UPQ4 AL359195.2-201ENST00000623657 4412 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms