Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 MRPS18BP2-201ENST00000434310 759 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 MTCO3P16-201ENST00000454456 754 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AP001992.1-205ENST00000462248 379 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 RPL5P30-201ENST00000465511 891 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 SYPL1P1-201ENST00000473622 768 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 RPS3AP43-201ENST00000479743 781 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC011005.3-201ENST00000491624 395 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC012170.1-201ENST00000495139 359 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 ENPP7P9-201ENST00000514456 627 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 HMGB1P19-201ENST00000517578 577 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AP006289.1-201ENST00000538089 277 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL163642.2-201ENST00000604722 1019 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 FAM27B-201ENST00000610601 213 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC006329.2-201ENST00000611491 394 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 MIR6780A-201ENST00000615089 68 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AF246928.1-201ENST00000623768 87 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC026422.1-201ENST00000623961 452 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL356596.1-201ENST00000624230 379 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 NCLP2-201ENST00000416078 1462 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN1Q9P244 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN1Q9P244 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN1Q9P244 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LRFN1Q9P244 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
LRFN1Q9P244 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN1Q9P244 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
LRFN1Q9P244 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
LRFN1Q9P244 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN1Q9P244 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN1Q9P244 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN1Q9P244 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 RNU6-343P-201ENST00000364709 104 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 SNORD51-201ENST00000384320 80 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AL357515.1-201ENST00000402967 542 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 RNU2-15P-201ENST00000410692 191 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 BX510359.2-201ENST00000417920 305 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC013429.2-201ENST00000418798 781 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC007742.1-201ENST00000425789 329 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 OR2B7P-201ENST00000429302 934 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 ELOCP26-201ENST00000436067 329 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC000111.2-201ENST00000448200 210 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 MTCO1P27-201ENST00000448269 226 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AL513533.1-201ENST00000453728 415 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 BX322784.1-201ENST00000455793 1077 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 RPS5P7-201ENST00000456664 608 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 snoU109.4-201ENST00000458953 143 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 RPS17P2-201ENST00000461663 408 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC024589.1-201ENST00000512207 263 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 RNU6-27P-201ENST00000516146 107 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 EEF1B2P4-201ENST00000551398 348 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC006349.1-201ENST00000555526 235 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC115286.1-201ENST00000604298 434 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC010424.2-201ENST00000607594 443 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 MIR6758-201ENST00000620653 63 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 MIR7703-201ENST00000620784 77 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN1Q9P244 SCN1A-220ENST00000641603 12506 ntBASIC4.46□□□□□ -1.7
LRFN1Q9P244 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LRFN1Q9P244 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN1Q9P244 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN1Q9P244 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN1Q9P244 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms