Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR591-201ENST00000385290 95 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 BTBD10P2-201ENST00000404779 676 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 NEK4P1-201ENST00000433383 879 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 HMGB1P45-201ENST00000435986 653 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 ISCA1P2-201ENST00000438679 421 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC069540.1-201ENST00000446320 988 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AL590399.6-201ENST00000446396 307 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 PTGES3P5-201ENST00000455109 434 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 PLGLA-201ENST00000465668 449 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 TMEM248P1-201ENST00000510579 951 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 RPL7L1P13-201ENST00000511702 739 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 RNU6-760P-201ENST00000516078 97 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 SNORA64.4-201ENST00000516632 81 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC074029.1-201ENST00000552531 1044 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC007224.1-201ENST00000564410 144 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 MIR4700-201ENST00000578311 74 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC006116.10-201ENST00000591836 581 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC020914.6-201ENST00000594327 272 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC245128.3-201ENST00000594721 748 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 NTAN1P1-201ENST00000603150 646 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 MIR378J-201ENST00000611988 109 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC018816.2-201ENST00000621460 353 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 PLCE1P1-201ENST00000622094 305 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC118273.1-201ENST00000525324 3006 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
VAPAQ9P0L0 AC004972.1-201ENST00000623934 2209 ntBASIC3.21□□□□□ -1.89
VAPAQ9P0L0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.89
VAPAQ9P0L0 AL079305.1-201ENST00000623159 3008 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 RNU6-805P-201ENST00000365643 106 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 LINC01347-201ENST00000417964 355 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 MTND2P16-201ENST00000419987 799 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC023128.2-201ENST00000420880 1223 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 HMGB3P11-201ENST00000440127 604 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC104689.1-201ENST00000473356 768 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 RN7SL132P-201ENST00000478131 296 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC108078.3-201ENST00000502633 489 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 HMGB3P15-201ENST00000507326 574 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 HIGD1AP3-201ENST00000515857 278 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 HMGB1P23-201ENST00000518743 568 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC006518.1-201ENST00000541449 943 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AP003717.3-201ENST00000544832 1180 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 PARP1P2-201ENST00000556806 195 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC022916.3-201ENST00000592961 742 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 YWHAQP7-201ENST00000603536 658 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AC009948.4-201ENST00000604692 675 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AL672296.1-201ENST00000427780 2158 ntBASIC3.21□□□□□ -1.9
VAPAQ9P0L0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VAPAQ9P0L0 AL645937.1-201ENST00000641739 1652 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 RNA5SP197-201ENST00000363357 119 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 SNORA73.2-201ENST00000364946 201 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 XKRYP4-201ENST00000414395 483 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms